Site Map

Overview of available pages and help topics.

General

Home About CMMI Team - U of A Contact Us Help Center FAQs

Unified Data

Master Submissions Participant Cohorts

Lab Data

BCGP Data Dictionary CBC Results HLQ Results Interpretive Results Metabolomics Results Proteomics Results Metagenomics Results Microbiome Results Raw Omics Files Downloads

Upload Data

Upload CBC Upload HLQ Upload Interpretive Upload Metabolomics Upload Proteomics Upload Metagenomics Upload Microbiome Bulk Upload Raw Files

Analysis & Search

Quick Statistical Analysis ML Pipelines Search Saved Searches

Help Topics

Clinical data

CBC (Complete Blood Count)CBC Units of Measurement HB (Hemoglobin)HCT (Hematocrit)HLQ (Health and Lifestyle Questionnaire)PLT (Platelet Count)RBC (Red Blood Cell Count)Reference Range Reference Range Status WBC (White Blood Cell Count)

Data management

Bulk Upload CSV Format Data Dictionary Data Validation Downloads Export Master Submissions Metadata

Data processing

IQR Method Iterative Imputer Mean Imputation Median Imputation MinMax Scaling Mode Imputation Outlier Detection Robust Scaling Standard Scaling Z-Score Method

Machine learning

Accuracy Confusion Matrix Cross-Validation F1 Score Feature Importance Feature Selection Gradient Boosting Grid Search Hyperparameter Tuning Isolation Forest KNN (K-Nearest Neighbors)Logistic Regression MAE (Mean Absolute Error)ML Pipeline MSE (Mean Squared Error)Neural Network Precision Random Forest Random Search Recall RMSE (Root Mean Squared Error)ROC-AUC SVM (Support Vector Machine)Target Variable Task Type (ML)XGBoost

Navigation

Filter Panel Global Search Saved Searches

Omics data

16S rRNA Sequencing Abundance Alpha Diversity Biofluid Date of Measurement Experimental Method Fold Change HMDB ID Instrument (Sequencing)LOD (Limit of Detection)Metabolomics Metagenomics Microbial Diversity Microbiome Proteomics Sample Type Sequencing Technology UniProt ID WGS (Whole Genome Sequencing)

Project & study

BCGP (British Columbia Generations Project)CMMI ID CMMI-DCC Cohort Participant ID Sample ID Study ID

Statistical analysis

ANOVA Chi-Square Test Confidence Interval Correlation Analysis P-Value Pearson Correlation Spearman Rank Correlation T-Test

FAQs

Data access

How do I search for a specific participant's data?What data types are available in the CMMI-DCC database?

Data export

How can I export data for external analysis?

Data upload

How do I upload data to the database?What should I do if my data upload fails validation?

Machine learning

How do I run a machine learning analysis on my data?

Understanding results

What does 'Out of Range' mean for CBC results?